"Modifying the L-tryptophan affinity of the ribosomal arrest peptide Tn" by Alexis Orlando Delgado Castillo

Date of Award

2025

Document Type

Thesis

Degree Name

Master of Science (MS)

Department

Biological Sciences

Committee Chair

Luis R. Cruz-Vera

Committee Member

Tatyana Sysoeva

Committee Member

Joseph D. Ng

Research Advisor

Luis R. Cruz-Vera

Subject(s)

Biosensors, Peptides--Biotechnology, Ribosomes, Genetic regulation

Abstract

Since creating biosensors from zero has proven a more challenging enterprise than expected, resorting into naturally occurring regulatory systems already characterized represents a more accurate, rapid, and attractive option. Various previous strategies have sought to exploit and modify regulatory elements that sense for different molecules, including monosaccharides (Tang et al., 2008), secondary metabolites (Flachbart et al., 2021), and other amino acids (Della Corte et al., 2020). This study aims to leverage current scientific knowledge and advances concerning the structure and function of the ribosomal arrest peptide TnaC. With this research I integrated the TnaC ribosome-arresting peptide into a new biosensor that responds to the presence of tryptophan by exhibiting fluorescence, which proved to be more fine-tuned than previous designs. Additionally, I evaluate the feasibility of modifying in the TnaC' sensing domains to equip it with novel detection abilities, setting a precedent for the versatility of engineering the TnaC’s ligand specificities.

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