Date of Award

2026

Document Type

Thesis

Degree Name

Master of Science (MS)

Department

Biological Sciences

Committee Chair

Roy D. Magnuson

Committee Member

Tatyana Sysoeva

Research Advisor

Luis R. Cruz Vera

Subject(s)

Drug resistance in microorganisms--Research, Genetic regulation, Indole, Macrolide antibiotics, Escherichia coli

Abstract

Various genes have been proposed to play a role in the action of indole, a bacterial hormone involved in biofilm and quorum sensing. Previous work found that E. coli strains carrying a macrolide-resistant mutation in the uL22 ribosomal protein reduce tna operon mRNA levels and, consequently, decrease indole production. This ribosomal mutation also increases expression of the gad regulon, a genetic unit involved in acid resistance at pH below 2. The gad regulon is involved in bacterial survival under environmental challenges, primarily regulating intracellular acid resistance, and its expression appears to depend on indole production. In this work, we work on identifying the factors regulating the gad regulon when indole production is affected. Determining these factors could lead to the identification of genetic targets to inhibit the survival of pathogenic, macrolide-resistant E. coli that may exhibit greater resistance to acidic conditions in a host’s digestive tract. I hypothesize that cis- and trans-acting genetic elements regulate genes in the gad regulon by sensing indole production or tnaCAB operon expression.

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